Information for 1-AGCATGGAGAGWGAWA (Motif 1)

C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
Reverse Opposite:
C G A T C G T A A G C T A T G C G C T A A G T C A C G T G T A C A C G T A G T C A G T C C G T A A C G T T A C G A G T C A G C T
p-value:1e-19
log p-value:-4.520e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.9 +/- 26.4bp
Average Position of motif in Background36.3 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGCATGGAGAGWGAWA-------
-----GGAAAGCGAAACCAAAAC
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
--AATGGAAAAT----
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCATGGAGAGWGAWA
CTACTTGGATACGGAAT
 A C G T C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
--AATGGAAAAT----
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
--NNTGGAAANN----
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
--NATGGAAAAN----
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:forward strand
Alignment:AGCATGGAGAGWGAWA--
------GAAAGTGAAAGT
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
NNNACCGAGAGTNNN-
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA
----TGGAAAA-----
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGCATGGAGAGWGAWA------
-AAANNGAAAGTGAAAGTAAAN
 C T G A C T A G A G T C G T C A C G A T A C T G A C T G C G T A A C T G C G T A A C T G C G A T A T C G C T G A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A