Information for 2-CCCRCTAGCATCT (Motif 4)

A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G C T A C T G A G T C A G C T C G T A A C T G A G C T A C T G A C T G A C T G
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.6 +/- 23.2bp
Average Position of motif in Background71.3 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCRCTAGCATCT
CGCCCCCTGACA---
 A C G T A C G T A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCCRCTAGCATCT------
--CCNNACCATCTGGCCTN
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCCRCTAGCATCT----
-CTACTAGGATGTNNTN
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCCRCTAGCATCT------
NNNNNCGATANNATCTNNNNAN
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCCRCTAGCATCT------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCCRCTAGCATCT---
------ACCATCTGTT
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCCRCTAGCATCT--
TACCATAGCAACGGT
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCCRCTAGCATCT---
------AACATCTGGA
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCCRCTAGCATCT-
--SCCTAGCAACAG
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCCRCTAGCATCT------
--NNNNAGCAGCTGCTGAN
 A G T C G T A C A G T C C T A G A G T C A C G T C T G A A C T G A G T C C T G A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G