Information for 19-GACAGTGGCCTCA (Motif 36)

A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
Reverse Opposite:
A C G T C T A G C T G A A C T G A T C G A G T C A G T C C G T A A G T C A C G T A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.4 +/- 22.2bp
Average Position of motif in Background54.1 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GACAGTGGCCTCA
AGGTCANTGACCTN-
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GACAGTGGCCTCA
-ACAAAGGNBCCT
 A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GACAGTGGCCTCA
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACAGTGGCCTCA
AACAAAGG-----
 A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GACAGTGGCCTCA
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACAGTGGCCTCA
TTGACAG--------
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GACAGTGGCCTCA
-----TGACCTYA
 A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GACAGTGGCCTCA
----GTGACCTT-
 A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACAGTGGCCTCA
AAAACAATGG-----
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACAGTGGCCTCA
RAACAATGGN----
 A C G T A C T G C G T A A G T C C G T A A C T G C G A T A C T G A C T G T A G C A G T C A G C T G A T C C G T A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T