Information for 5-ACTGTCAATG (Motif 27)

C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
Reverse Opposite:
T A G C G T C A G C A T A G C T C A T G C T G A G A T C C T G A A T C G C G A T
p-value:1e-6
log p-value:-1.602e+01
Information Content per bp:1.713
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif255.1
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets35.2 +/- 26.4bp
Average Position of motif in Background47.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---ACTGTCAATG
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACTGTCAATG
GCTGTCAA--
 C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTGTCAATG
-NTGTCAN--
 C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACTGTCAATG
CCTGTCAA--
 C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTCAATG-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGTCAATG--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTCAATG
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTCAATG-
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTCAATG-
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACTGTCAATG-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C G T C G T A A T G C A G C T C T A G A G C T G T A C T C G A C G T A C A G T A C T G A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C