Information for 1-AGGCGTCGGG (Motif 12)

G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
Reverse Opposite:
G A T C G A T C A G T C C A T G T C G A T G A C C A T G T A G C A T G C C A G T
p-value:1e-10
log p-value:-2.438e+01
Information Content per bp:1.659
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif8.98%
Number of Background Sequences with motif1577.5
Percentage of Background Sequences with motif3.32%
Average Position of motif in Targets47.6 +/- 24.1bp
Average Position of motif in Background49.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGGCGTCGGG--
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGTCGGG--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCGTCGGG
AGGCCTNG--
 G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGTCGGG---
CAGGCCNNGGCCNN
 A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGCGTCGGG
AGGCCTAG--
 G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGCGTCGGG--
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGTCGGG
TAAGGCGTCTTG
 A C G T A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGGCGTCGGG---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGGCGTCGGG
VBSYGTCTGG
 G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCGTCGGG
-GGCGCGCT-
 G T C A T A C G A T C G G A T C A C T G A G C T G T A C T C A G C T A G C T A G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T