Information for 8-GKGAGGKGTGMGAGCC (Motif 11)

A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
Reverse Opposite:
C A T G T C A G A G T C A C G T A G T C A C G T A T G C C G T A A T G C G T C A A T G C A G T C A C G T A G T C T G C A T A G C
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.702
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif39.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.0 +/- 22.1bp
Average Position of motif in Background53.1 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX15/MA0803.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGA-----
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGA-----
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GKGAGGKGTGMGAGCC--
-----AGGTGNCAGACAG
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC-
-----AGGTGHCAGACA
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGA-----
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGAAA---
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGA-----
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GKGAGGKGTGMGAGCC
--GTGGCGTGACNG--
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
---AGGTGTGA-----
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GKGAGGKGTGMGAGCC
--AAGGTGTGAAAAT-
 A C T G A C G T A C T G T G C A C T A G T A C G C A G T A T C G A C G T A T C G T G C A T A C G G T C A A C T G A G T C G A T C
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T