Information for 1-GGCTGTGCTGTGGCTC (Motif 1)

C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A C T A G A T G C G T A C C T G A A G T C G T C A A C T G A G T C C T G A A G T C C G T A A C T G G T A C G T A C
p-value:1e-16
log p-value:-3.882e+01
Information Content per bp:1.756
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.4 +/- 21.4bp
Average Position of motif in Background40.6 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCTGTGCTGTGGCTC
-GCTGTG---------
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCTGTGCTGTGGCTC
-GCTGTGGTTT-----
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGTGCTGTGGCTC
NNTCCTGCTGTGNNN------
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTGTGCTGTGGCTC
TGCTGTGATTT-----
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCTGTGCTGTGGCTC
GTCTGTGGTTT-----
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTGTGCTGTGGCTC
NNHTGTGGTTWN----
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGTGCTGTGGCTC
TNTCCTGCTGTGNNG------
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCTGTGCTGTGGCTC
--CTGTGGTTTN----
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GGCTGTGCTGTGGCTC
------GCTCGGSCTC
 C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GGCTGTGCTGTGGCTC
TCNCCTGCTGNGNNN------
 A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C C G A T A C T G G A C T A C T G T A G C C A G T T A C G A G C T A C T G A T C G A G T C A G C T A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T