Information for 5-CTAATTGGATTWGTCT (Motif 8)

A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
Reverse Opposite:
C T G A A C T G C G T A A T G C G C T A T G C A T C G A C G A T G T A C G T A C C G T A T C G A A G C T G C A T C G T A T A C G
p-value:1e-14
log p-value:-3.294e+01
Information Content per bp:1.658
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets44.9 +/- 19.1bp
Average Position of motif in Background40.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTAATTGGATTWGTCT
YTAATYNRATTA----
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T A C G T A C G T

Phox2b/MA0681.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
-TAATTAAATTA----
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A C G T G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
-TAATTAAATTA----
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
GTAATCDGATTA----
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
-TAATTNVATTAN---
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
-TAATTAAATTA----
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTAATTGGATTWGTCT
GNNTTAATTGGTTGTT---
 A C G T A C G T A C G T A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTAATTGGATTWGTCT
--AAGAGGATTAG---
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTAATTGGATTWGTCT
NTAATTGG--------
 A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTAATTGGATTWGTCT
NNNTTAATTGGTTTTT---
 A C G T A C G T A C G T A T G C G A C T C G T A C T G A A G C T G C A T A C T G C A T G G C T A A G C T A C G T C G A T A T C G G A C T G T A C G A C T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T A C G T A C G T A C G T