Information for 19-GTTTCTGGGC (Motif 30)

A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C
Reverse Opposite:
A C T G A G T C A T G C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.461e+01
Information Content per bp:1.945
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets70.3 +/- 14.5bp
Average Position of motif in Background53.1 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTTTCTGGGC-
-WDNCTGGGCA
 A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTGGGC
CTGTTGCTAGGS
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTGGGC
TGGTTTCAGT--
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCTGGGC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTGGGC----
KGTTGCTAGGMAACA
 A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTTTCTGGGC
VBSYGTCTGG--
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTGGGC----
NNNNTTGTGTGCTTNN
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTTTCTGGGC--
-TTTCCAGGAAA
 A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T
A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTTCTGGGC---
--TTCTTGGAAAN
 A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCTGGGC---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A T C G C T A G A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G