Information for 14-CTGATTAAACAGC (Motif 18)

G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
Reverse Opposite:
C T A G T A G C C G A T A C T G G A C T A G C T A G C T C G T A C G T A C G A T A T G C C G T A C A T G
p-value:1e-12
log p-value:-2.821e+01
Information Content per bp:1.765
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.1 +/- 21.3bp
Average Position of motif in Background54.4 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGATTAAACAGC
AGCTCATTAT-----
 A C G T A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGATTAAACAGC
ACTAATTAAA----
 A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGATTAAACAGC
CTAATTAA-----
 G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTGATTAAACAGC
GTAATTAA-----
 G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGATTAAACAGC
---ATTAAA----
 G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTGATTAAACAGC
CCTAATTAAA----
 A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T A C G T A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGATTAAACAGC
NCTAATTAANN---
 A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T A C G T A C G T

PH0147.1_Pou3f2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTGATTAAACAGC
NNNACTAATTAATTANC
 A C G T A C G T A C G T A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

NKX6-2/MA0675.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTGATTAAACAGC
CTAATTAA-----
 G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGATTAAACAGC
GCTAATTAGC----
 A C G T G A T C C G A T A T C G C G T A A C G T A C G T C T G A C T G A C T G A G T A C C G T A A C T G A G T C
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T A C G T A C G T