Information for 12-CTCACTTAATTAC (Motif 16)

T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
Reverse Opposite:
A T C G G A C T C T G A C G T A A C G T C G A T C T G A C T G A T C A G C A G T C T A G C G T A A C T G
p-value:1e-12
log p-value:-2.934e+01
Information Content per bp:1.783
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.4 +/- 20.5bp
Average Position of motif in Background44.8 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0103.1_Meox1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTCACTTAATTAC---
CTGAGGTAATTACCNC
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:2
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CTCACTTAATTAC
-----TTAATTAN
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

LMX1B/MA0703.1/Jaspar

Match Rank:3
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CTCACTTAATTAC
-----TTAATTAN
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTCACTTAATTAC---
TNCCATTAATTACTNC
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C A C G T A C G T A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

MEOX2/MA0706.1/Jaspar

Match Rank:5
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTCACTTAATTAC-
----NTTAATTACN
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C A C G T
A C G T A C G T A C G T A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T

LMX1A/MA0702.1/Jaspar

Match Rank:6
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:CTCACTTAATTAC
-----TTAATTAA
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A

MNX1/MA0707.1/Jaspar

Match Rank:7
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CTCACTTAATTAC-
----TTTAATTANN
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C A C G T
A C G T A C G T A C G T A C G T C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTCACTTAATTAC---
NTNAGNTAATTACCTN
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CTCACTTAATTAC
---ADBTAATTAR
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
A C G T A C G T A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G

VAX1/MA0722.1/Jaspar

Match Rank:10
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CTCACTTAATTAC
-----CTAATTAC
 T G A C C G A T A G T C G C T A A G T C A G C T A G C T C G T A C G T A A C G T A G C T C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C