Information for 16-ATTCYCTAAKKSS (Motif 12)

C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
Reverse Opposite:
A T C G A T G C G T C A G T A C A C G T A C G T C G T A A C T G C T A G A C T G C G T A C G T A A C G T
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.836
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.9 +/- 26.4bp
Average Position of motif in Background67.3 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:ATTCYCTAAKKSS
-----CTAATKGV
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Barhl1/MA0877.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATTCYCTAAKKSS-
----GCTAATTGCT
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATTCYCTAAKKSS
GGTTCCNNAATTTG
 A C G T C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTCYCTAAKKSS----
ATTNNTTAATTGCTTGT
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTCYCTAAKKSS----
ATTNNTTAATTGCTTGT
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTCYCTAAKKSS
ATTGCATAA----
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTCYCTAAKKSS
NGTTACGTAANN--
 A C G T C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
C A T G T C A G G C A T C A G T C T G A A G T C T C A G G A C T T G C A C G T A A G C T C T A G A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATTCYCTAAKKSS
-----NTAATTGN
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

Hmx2/MA0897.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTCYCTAAKKSS----
ATTCNTTAATTGCTTGT
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T

PH0042.1_Hmx2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATTCYCTAAKKSS----
ATTCNTTAATTGCTTGT
 C G T A A C G T C G A T A G T C A G T C A G T C A C G T C G T A G T C A C A G T A C G T A T C G A T G C A C G T A C G T A C G T A C G T
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T