Information for 1-TGCTAACCGCNGG (Motif 4)

A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
Reverse Opposite:
A G T C G A T C A C T G A C T G A G T C A C T G A T C G C G A T A C G T C T G A C T A G A T G C C G T A
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.698
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif31.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.3 +/- 23.4bp
Average Position of motif in Background54.6 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCTAACCGCNGG
GGTGCCAAGT-----
 A C G T A C G T A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCTAACCGCNGG
---YAACBGCC--
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCTAACCGCNGG
--NHAACBGYYV-
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCTAACCGCNGG
ATGCCAACC-----
 A C G T A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGCTAACCGCNGG
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCTAACCGCNGG
----AACCGANA-
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCTAACCGCNGG
--CCAACTGCCA-
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCTAACCGCNGG
TTGCCAAG------
 A C G T A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCTAACCGCNGG
---AAACCGCAA-
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCTAACCGCNGG
-GCTAAACGGT--
 A C G T T A C G G A T C G A C T G T C A C G T A T A G C G T A C A C T G T G A C G T A C C T A G A C T G
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T