Information for 5-CWCAAAAAAA (Motif 13)

G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T C G A T A C G T A C G T A C G T A C G T C G A T A C T G C G A T A C T G
p-value:1e-4
log p-value:-1.052e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif16.13%
Number of Background Sequences with motif206.5
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets61.4 +/- 20.4bp
Average Position of motif in Background52.3 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAAAAA--
TACTGGAAAAAAAA
 A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CWCAAAAAAA------
GTTCAAAAAAAAAATTC
 A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CWCAAAAAAA------
GTTAAAAAAAAAAATTA
 A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAAAAA----
CTACCAATAAAATTCT
 A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAAAAA----
ATATCAAAACAAAACA
 A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWCAAAAAAA-
-CCAATAAAAC
 G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAAAAA----
AACCCAATAAAATTCG
 A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CWCAAAAAAA-
-CCAATAAAAA
 G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CWCAAAAAAA-----
AATGCAATAAAATTTAT
 A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CWCAAAAAAA----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G T A C C G T A A G T C C G T A G T C A C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A