Information for 15-CACGCAGTTTCCC (Motif 20)

A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C T G A C G T A A G T C A C G T A C T G A G T C A C T G C G A T A C T G
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.0 +/- 17.3bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACGCAGTTTCCC
CACGCA-------
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CACGCAGTTTCCC---
------HTTTCCCASG
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CACGCAGTTTCCC--
-----ATTTTCCATT
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CACGCAGTTTCCC--
-----ATTTTCCATT
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CACGCAGTTTCCC
TBGCACGCAA------
 A C G T A C G T A C G T A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACGCAGTTTCCC-----
----CAGTTTCGNTTCTN
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CACGCAGTTTCCC--
-----ATTTTCCATT
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACGCAGTTTCCC
--GGGAATTTCC-
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CACGCAGTTTCCC---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CACGCAGTTTCCC---
------NYTTCCCGCC
 A G T C C G T A A G T C T A C G A G T C C G T A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C