Information for 8-CCGCCATTTT (Motif 10)

A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T
Reverse Opposite:
C T G A C T G A T G C A C G T A A C G T C T A G C T A G G T A C C T A G C T A G
p-value:1e-11
log p-value:-2.683e+01
Information Content per bp:1.837
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif320.0
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets54.7 +/- 28.8bp
Average Position of motif in Background49.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATTTT-
GCNGCCATCTTG
 A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCATTTT-
GCCGCCATCTTG
 A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CCGCCATTTT
GTCCGCCATTA-
 A C G T A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------CCGCCATTTT-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CCGCCATTTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

E2F3/MA0469.2/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------CCGCCATTTT-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCGCCATTTT----
--KCTATTTTTRGH
 A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGCCATTTT----
--GCTATTTTTGGM
 A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGCCATTTT----
--GCTATTTTTAGC
 A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGCCATTTT--
--NCCATTGTTY
 A G T C G A T C A C T G A G T C A G T C C G T A A C G T A C G T A G C T A G C T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T