Information for 2-TGTGCTTGGGGAT (Motif 5)

A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C A G T C A G T C A G T C C G T A C G T A A T C G A G T C C G T A A G T C C G T A
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.2 +/- 20.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TGTGCTTGGGGAT
------TGGGGA-
 A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCTTGGGGAT
CTGTTCCTGG----
 A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCTTGGGGAT
CTGTGGTTTN----
 A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCTTGGGGAT
NNTGTGGTTT-----
 A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCTTGGGGAT
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCTTGGGGAT
NNHTGTGGTTWN----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTGCTTGGGGAT
GCTGTGGTTT-----
 A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGTGCTTGGGGAT
GTCTGTGGTTT-----
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTGCTTGGGGAT
TGACCTTGAN---
 A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGCTTGGGGAT
TGACCTTGAV---
 A C G T A C T G A C G T A C T G A T G C C G A T A C G T A C T G C T A G C T A G A C T G C T G A A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T