Information for 9-GCSGGAGACC (Motif 19)

T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G A T A G T C A G T C A T G C C T A G A T G C
p-value:1e-3
log p-value:-8.420e+00
Information Content per bp:1.754
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif1302.6
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets50.2 +/- 28.9bp
Average Position of motif in Background49.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCSGGAGACC
--CGGAGC--
 T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCSGGAGACC
GGCGGGAARN-
 A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCSGGAGACC
GGGCGGGAAGG-
 A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCSGGAGACC----
TTGGGGGCGCCCCTAG
 A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

E2F4/MA0470.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCSGGAGACC
GGGCGGGAAGG-
 A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCSGGAGACC----
----AAGACCCYYN
 T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCSGGAGACC
AGGTGHCAGACA
 A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCSGGAGACC-
GGTTAGAGACCT
 A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCSGGAGACC-
AGGTGNCAGACAG
 A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCSGGAGACC----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T T A C G G A T C A T C G C T A G A C T G G C T A A C T G T G C A A G T C G T A C A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T