Information for 10-CGGGCAGAGACGC (Motif 17)

A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
Reverse Opposite:
A T C G A T G C A C T G A G C T A G T C G A C T A G T C A G C T A C T G A G T C T A G C G T A C A C T G
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.782
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif130.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets37.1 +/- 23.3bp
Average Position of motif in Background50.6 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGGGCAGAGACGC
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAGAGACGC
TNNGGGCAG------
 A C G T A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGGGCAGAGACGC
--CACAGN-----
 A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CGGGCAGAGACGC
CCTGCTGAGH---
 A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CGGGCAGAGACGC
RGKGGGCGGAGC---
 A C G T A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCAGAGACGC------
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CGGGCAGAGACGC-
AGGTCANTGACCTN
 A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CGGGCAGAGACGC-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CGGGCAGAGACGC
---CCAGACRSVB
 A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGGGCAGAGACGC
GGGGGCGGGGCC--
 A C G T A G T C A C T G A T C G T C A G A G T C C T G A A C T G C G T A A C T G T C G A G T A C A T C G A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T