Information for 7-GTCCAGTCGC (Motif 16)

A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C
Reverse Opposite:
A C T G G A T C A T C G T C G A A G T C A C G T A C T G A C T G T G C A A T G C
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.857
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.46%
Number of Background Sequences with motif282.1
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets58.3 +/- 23.0bp
Average Position of motif in Background49.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
TGCCCAGNHW-
 A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGTCGC----
ATGTACAGTAGCAAAG
 A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTCCAGTCGC---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCCAGTCGC
TGTCTAGACG-
 A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCCAGTCGC----
ATTTACAGTAGCAAAA
 A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCCAGTCGC---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GTCCAGTCGC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCCAGTCGC---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCCAGTCGC
ACTAGCCAATCA-
 A C G T A C G T A C G T A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCCAGTCGC--
--CCAGACRSVB
 A T C G A C G T A G T C A G T C G T C A A C T G A G C T A T G C C T A G A G T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C