Information for 6-TTGTGCAGACAGC (Motif 12)

A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A C G T A
p-value:1e-8
log p-value:-1.907e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 21.5bp
Average Position of motif in Background68.8 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTGTGCAGACAGC
----CCAGACAG-
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TTGTGCAGACAGC-
----CCAGACRSVB
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGTGCAGACAGC
-GGTGYTGACAGS
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGTGCAGACAGC
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCAGACAGC-
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGTGCAGACAGC--
-TTTGCACACGGCAC
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A C G T
A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGTGCAGACAGC---
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTGTGCAGACAGC
----BCAGACWA-
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTGTGCAGACAGC
-CGTCTAGACA--
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCAGACAGC-
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T