Information for 4-GTAGACCTACAGT (Motif 7)

C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A T C G A C G T C G T A C T A G A T C G A C G T A G T C C G A T T C G A A G T C
p-value:1e-11
log p-value:-2.604e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 19.6bp
Average Position of motif in Background68.1 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTAGACCTACAGT-----
--TGACCTNTAGTAACCC
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAGACCTACAGT--------
--TGACCTAAAGTAACCTCTG
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTAGACCTACAGT----
-CNNNGCTACTGTANNN
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTAGACCTACAGT----
-TNNTGCTACTGTNNNN
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTAGACCTACAGT--
-TTGACCTANTTATN
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GTAGACCTACAGT---
AGGAGACCCCCAATTTG
 A C G T C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTAGACCTACAGT--
CATAAGACCACCATTAC
 A C G T A C G T C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTAGACCTACAGT
--TGACCTTGAT-
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTAGACCTACAGT
-ATGACCTTGA--
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTAGACCTACAGT------
--NNNANTGCAGTGCNNTT
 C T A G A C G T C G T A C T A G C G T A A T G C A G T C A C G T G T C A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T