Information for 4-GAGASCAACA (Motif 6)

T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A
Reverse Opposite:
A C G T C T A G G C A T A C G T A T C G T A G C A G C T A T G C A G C T A T G C
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.603
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif95.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets46.9 +/- 25.2bp
Average Position of motif in Background47.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAGASCAACA----
CATAAGACCACCATTAC
 A C G T A C G T A C G T T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGASCAACA
CGGAGC----
 T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGASCAACA
GGGAGGACNG
 T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGASCAACA----
TTTAGAACAATAAAAT
 A C G T A C G T T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGASCAACA-
-DGATCRATAN
 T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGASCAACA----
TTAAGAACAATAAATT
 A C G T A C G T T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGASCAACA-
NTTNAGAACAATTA
 A C G T A C G T A C G T T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GAGASCAACA
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGASCAACA--
GCGACCACACTG
 T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAGASCAACA---
-GGACCACCCACG
 T A C G T C G A T A C G T C G A A T C G T A G C T G C A C G T A G A T C T G C A A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G