Information for 6-CACGTGATTC (Motif 12)

A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
Reverse Opposite:
A C T G C G T A T C G A A G C T A G T C C G T A A G T C A C T G A C G T A C T G
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.860
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif47.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets36.7 +/- 30.4bp
Average Position of motif in Background44.7 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGATTC
NCACGTGACN-
 A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:2
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATTC
ATCACGTGAT--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATTC
ATCACGTGAT--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-CACGTGATTC
GCACGTGA---
 A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGATTC
NCACGTGACN-
 A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATTC
ACCACGTGAC--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:7
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATTC
ATCACGTGAC--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:8
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATTC
GTCACGTGAT--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C A G C G A T A T G C C T G A A T G C T A C G G A C T A C T G C G T A A G C T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CACGTGATTC
GTCACGTGAT--
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CACGTGATTC
GTCACGTGACYV
 A C G T A C G T A G T C C G T A G T A C A C T G A C G T C T A G C T G A A G C T G C A T A G T C
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C