Information for 2-CAARAAGCCGCGGCGG (Motif 6)

A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
Reverse Opposite:
A G T C A T G C C T A G A G T C G T A C T A C G A G T C T C A G C T A G G T A C A G C T A C G T A G C T A G C T A G C T T A C G
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.748
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.7 +/- 21.6bp
Average Position of motif in Background46.2 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAARAAGCCGCGGCGG-
---CAGGCCNNGGCCNN
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAARAAGCCGCGGCGG
AGCAACAGCCGCACC--
 A C G T A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAARAAGCCGCGGCGG-
--CAAAGGCGTGGCCAG
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G A C G T
A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAARAAGCCGCGGCGG-
---ANTGCGGGGGCGGN
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G A C G T
A C G T A C G T A C G T G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAARAAGCCGCGGCGG
--ACATGCCCGGGCAT
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:CAARAAGCCGCGGCGG-----
----NNTNNGGGGCGGNGNGN
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAARAAGCCGCGGCGG
----CAGCC-------
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAARAAGCCGCGGCGG
--NGAAGC--------
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CAARAAGCCGCGGCGG
--AGCAGCTGCTNN--
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CAARAAGCCGCGGCGG---
-----GGCGGGGGCGGGGG
 A T G C C T G A C T G A C T G A G T C A C T G A A C T G A G T C A G T C T A C G A G T C C A T G A C T G A G T C T A C G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G