Information for 7-GAGGAGGAGCAGC (Motif 17)

T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
Reverse Opposite:
A T C G A G T C C A G T T A C G G A T C A C G T A T G C A G T C G C A T A T G C A G T C A G C T A G T C
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.745
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.09%
Number of Background Sequences with motif499.1
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets56.4 +/- 22.0bp
Average Position of motif in Background49.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF263/MA0528.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGAGCAGC-------
GGAGGAGGAGGGGGAGGAGGA
 A C G T T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGGAGGAGCAGC
GAGSCCGAGC---
 T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGAGCAGC
TGGGGAAGGGCM--
 A C G T T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGAGCAGC
GGGGGCGGGGC---
 A C G T T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGGAGGAGCAGC
-GGGAGGACNG--
 T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGAGGAGCAGC--
AAGGKGRCGCAGGCA
 T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGGAGCAGC
AGGGGGCGGGGCTG-
 A C G T A C G T T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGAGGAGCAGC
-RGKGGGCGGAGC
 T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGAGCAGC
AGAGGAAGTG----
 A C G T T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGGAGGAGCAGC
GCGCATGCGCAG-
 T C A G T C G A C T A G A T C G C G T A T C A G A T C G G T C A C T A G A T G C G T C A C T A G T A G C
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T