Information for 1-GCCGCCCGGGGGC (Motif 1)

A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C
Reverse Opposite:
A C T G A G T C T G A C A G T C G T A C A G T C A T C G C T A G C T A G A G T C A T C G C A T G G T A C
p-value:1e-12
log p-value:-2.791e+01
Information Content per bp:1.866
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif87.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets52.9 +/- 26.3bp
Average Position of motif in Background47.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCCGCCCGGGGGC-
--TGCCCNGGGGCA
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCGCCCGGGGGC--
-CCGCCCAAGGGCAG
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCCGGGGGC-
ACCCCCCCGGGGGGN
 A C G T A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCCGGGGGC-
NCCCCCCCGGGGGGN
 A C G T A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCGCCCGGGGGC-
CCCCCCCGGGGGNN
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCCGCCCGGGGGC-
--TGCCCTNGGGCA
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCGCCCGGGGGC-
--TGCCCTNGGGCA
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCGCCCGGGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCGCCCGGGGGC--
-TTGCCCTAGGGCAT
 A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T A C G T
A C G T C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCGCCCGGGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G G A T C A T G C A C T G A G T C A G T C A T G C A C T G A C T G A C T G A C T G T C A G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A