Information for 7-GCCTTTTTTT (Motif 15)

A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C T G A C T G A G T C
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 22.4bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCCTTTTTTT------
--TTTTTTTTCNNGTN
 A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCCTTTTTTT-
-CCTTTGTTTT
 A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTTTTTT------
NNNNTTTTTTTTTNAAC
 A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCTTTTTTT
-CCTTTGTT-
 A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTTTTTT-
CCTTGCAATTTTTNN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCTTTTTTT
-CCWTTGTY-
 A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTTTTTT----
NNNTCCTTTGTTCTNNN
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTTTTTT----
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTTTTTT-----
GNATTTTTTTTTTGANC
 A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTTTTTTT-
-YCTTTGTTCC
 A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C