Information for 6-GAAGCAAGTT (Motif 12)

C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
Reverse Opposite:
T C G A C T G A T A G C G C A T C G A T C T A G A T G C G A C T A C G T G A T C
p-value:1e-8
log p-value:-1.889e+01
Information Content per bp:1.665
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif554.4
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets51.5 +/- 27.1bp
Average Position of motif in Background49.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAAGCAAGTT-
AAGGCAAGTGT
 C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCAAGTT
NGAAGC-----
 A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAGCAAGTT
ANCAGGAAGT-
 A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAGCAAGTT
ACVAGGAAGT-
 A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAAGCAAGTT--
AGGGAAGTCATTTCT
 A C G T A C G T A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T A C G T A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGCAAGTT
AVCAGGAAGT-
 A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAGCAAGTT
ACAGGAAGTG
 C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAGCAAGTT
AGAGGAAGTG
 C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAAGCAAGTT
NATGTTGCAA---
 A C G T A C G T A C G T C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAGCAAGTT-
--AACAGGTGT
 C T A G T G C A C T G A T A C G G A T C C G T A C G T A A T C G G A C T A G C T A C G T
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T