Information for 10-GCCGCCAAGCAGT (Motif 7)

A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
Reverse Opposite:
C G T A A G T C A C G T A T C G A G T C A C G T C A G T A C T G A C T G A G T C A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.455e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 26.2bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGCAGT
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGCAGT
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCGCCAAGCAGT
--TGCCAA-----
 A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCAAGCAGT
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCGCCAAGCAGT
CGTGCCAAG----
 A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCAAGCAGT
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCAAGCAGT
CGCCCCCTGACA--
 A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCGCCAAGCAGT
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCGCCAAGCAGT
TTTCCCGCCMAV----
 A C G T A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCGCCAAGCAGT
--AGCCAATCGG-
 A C T G A G T C A G T C A C T G A G T C A G T C G C T A C G T A A C T G A T G C C G T A C T A G C G A T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T