Information for 9-GGGAGGTTCCTTC (Motif 6)

A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
Reverse Opposite:
C A T G C G T A C G T A A C T G A C T G C G T A C G T A G T A C T G A C G A C T A T G C A G T C A G T C
p-value:1e-11
log p-value:-2.615e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 23.1bp
Average Position of motif in Background28.3 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCCTTC
GGGAATTTCC---
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGAGGTTCCTTC
GGGAATTTCC---
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCCTTC
GGGGATTTCC---
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGAGGTTCCTTC
GGGGATTTCC---
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGTTCCTTC
NGGGGATTTCCC--
 A C G T A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGAGGTTCCTTC-
GCTGGGGGGTACCCCTT
 A C G T A C G T A C G T A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGAGGTTCCTTC-
--NNAYTTCCTGHN
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGGAGGTTCCTTC
---ATTTTCCATT
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGGAGGTTCCTTC-
--------GCTTCC
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGGAGGTTCCTTC
---ATTTTCCATT
 A C T G A C T G A T C G C T G A A C T G A C T G A C G T A C G T A G T C A G T C A C G T A C G T G T A C
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T