Information for 5-GCATTGCACT (Motif 3)

A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T
Reverse Opposite:
C G T A C T A G A G C T A C T G T G A C C G T A T G C A A G C T C T A G A G T C
p-value:1e-14
log p-value:-3.333e+01
Information Content per bp:1.846
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif38.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.2 +/- 25.1bp
Average Position of motif in Background48.7 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GCATTGCACT---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCATTGCACT-
GGGATTGCATNN
 A C G T A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATTGCACT--
NNGCNCTGCGCGGC
 A C G T A C G T A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCATTGCACT---
--ATTGCACAATA
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCATTGCACT------
-CCTTGCAATTTTTNN
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCATTGCACT------
NNATTGGACTTTNGNN
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCATTGCACT
ACATTCCA--
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-12
Orientation:reverse strand
Alignment:------------GCATTGCACT
TGGCCANNNNNGGAACTGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCATTGCACT----
-----CCACTTGAA
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCATTGCACT----
----NSCACTYVAV
 A C T G A G T C C T G A A C G T A C G T A C T G G T A C C T G A A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G