p-value: | 1e-10 |
log p-value: | -2.433e+01 |
Information Content per bp: | 1.928 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.53% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 57.2 +/- 19.4bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RUNX2/MA0511.2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCGGTTGACCTA TTGCGGTTT----- |
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RUNX3/MA0684.1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGCGGTTGACCTA TTTGCGGTTT----- |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 3 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA-- --CNNTTGACCTTTG |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA TGACCTTGACCT- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA ------TGACCT- |
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RORA(var.2)/MA0072.1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA------ -----TTGACCTANTTATN |
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RORA/MA0071.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA--- ------TGACCTTGAT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 8 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA- ------TGACCTYA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA--- ------TGACCTARTT |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGCGGTTGACCTA TGACCTTGACCT- |
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