Information for 8-AGATGGAGCTGTT (Motif 3)

C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
Reverse Opposite:
G T C A G C T A A G T C G T C A A C T G A G T C C A G T A T G C A G T C G T C A A G C T A G T C A G C T
p-value:1e-26
log p-value:-6.052e+01
Information Content per bp:1.802
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 19.0bp
Average Position of motif in Background75.9 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGATGGAGCTGTT--
AGATGCTRCTRCCHT
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGAGCTGTT
AACAGATGGC------
 A C G T A C G T A C G T C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGAGCTGTT
AACAGATGGT------
 A C G T A C G T A C G T C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGATGGAGCTGTT
AAGGCCAGATGGTCCGG--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGATGGAGCTGTT------
--AAGACGCTGTAAAGCGA
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGATGGAGCTGTT------
--AAGACGCTGTAAAGCGA
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGATGGAGCTGTT---
-GGNGCGNCTGTTNNN
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGATGGAGCTGTT------
--AGGACGCTGTAAAGGGA
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGATGGAGCTGTT
-----CAGCTGTT
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGATGGAGCTGTT
--NNGCAGCTGTT
 C T G A A C T G C T G A A C G T A C T G T A C G G T C A A C T G G T A C A C G T A C T G C A G T A C G T
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T