Information for 1-KYGAGRGGGGTRAGWG (Motif 1)

C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
Reverse Opposite:
G A T C C G T A A G T C C G A T A G C T G T C A G T A C A T G C G T A C A T G C A G C T A G T C A C G T G T A C C T G A G T A C
p-value:1e-12
log p-value:-2.918e+01
Information Content per bp:1.689
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif17.14%
Number of Background Sequences with motif32.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.5 +/- 19.8bp
Average Position of motif in Background56.5 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:KYGAGRGGGGTRAGWG
-GGAGGGGGAA-----
 C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--KYGAGRGGGGTRAGWG
TGCGGAGTGGGACTGG--
 A C G T A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-KYGAGRGGGGTRAGWG
BTBRAGTGSN-------
 A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-KYGAGRGGGGTRAGWG
CTTGAGTGGCT------
 A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KYGAGRGGGGTRAGWG
GTGGGGGGGG------
 C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:KYGAGRGGGGTRAGWG
TTGAGTGSTT------
 C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--KYGAGRGGGGTRAGWG
CTTCGCGGGGGGTC----
 A C G T A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--KYGAGRGGGGTRAGWG
NATNGGGNGGGGANAN--
 A C G T A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-KYGAGRGGGGTRAGWG
ANTGCGGGGGCGGN---
 A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----KYGAGRGGGGTRAGWG
NNNACCGAGAGTNNN-----
 A C G T A C G T A C G T A C G T C A T G G A C T A C T G C G T A A C T G C T G A T A C G A C T G A T C G C A T G C A G T C T G A C G T A T C A G G C A T C T A G
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T