Information for 2-CATTACACGC (Motif 5)

A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G C T A C T G C G A T C G T A C G T A A C G T A C T G
p-value:1e-10
log p-value:-2.486e+01
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.7 +/- 23.8bp
Average Position of motif in Background43.5 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:CATTACACGC-
-----CACGCA
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CATTACACGC--
--TBGCACGCAA
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATTACACGC--
VDTTTCCCGCCA
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATTACACGC-
-DTTTCCCGCC
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T
A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATTACACGC---
---GGCACGCGTC
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTACACGC---
-TTTTCGCGCGAA
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CATTACACGC--
----GCACGTNC
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTACACGC
YCATTAMC---
 A C G T A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATTACACGC-
-NYTTCCCGCC
 A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C A C G T
A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CATTACACGC
ACATTCCA---
 A C G T A G T C T C G A A C G T C G A T C G T A A G T C C T G A A G T C A C T G A G T C
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T