Information for 2-GCCTGGGGACAGG (Motif 3)

A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A T C G A G C T A G T C A G T C G T A C A G T C G T C A A C T G A T C G A G T C
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.868
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif16.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets59.4 +/- 22.3bp
Average Position of motif in Background43.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGGGACAGG
WDNCTGGGCA----
 A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGGGACAGG
TCACCTCTGGGCAG-
 A C G T A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGGGACAGG
TGCCCNGGGGCA--
 A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCTGGGGACAGG
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCTGGGGACAGG
GCCTCAGGGCAT-
 A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCTGGGGACAGG
SCCTSAGGSCAW-
 A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCCTGGGGACAGG
---TGGGGA----
 A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCTGGGGACAGG
-CSTGGGAAAD--
 A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGGGACAGG
TGTCAGGGGGCG--
 A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGGGACAGG
NGCCTGAGGCN---
 A C G T A C T G A T G C A G T C A C G T A C T G C A T G A C T G C T A G C T G A A T G C G T C A A C T G A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T