Information for 9-TAAGCCAGTC (Motif 26)

G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C
Reverse Opposite:
A T C G G C T A A G T C A C G T C A T G C T A G T G A C C G A T G C A T C G T A
p-value:1e-6
log p-value:-1.564e+01
Information Content per bp:1.666
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif489.3
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets52.6 +/- 24.3bp
Average Position of motif in Background49.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TAAGCCAGTC-
-ATGCCAGACN
 G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCAGTC-
ACTAGCCAATCA
 A C G T G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAAGCCAGTC
--TGCCAA--
 G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAAGCCAGTC--
--AGCCAATCGG
 G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAAGCCAGTC
CGTGCCAAG-
 G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAGCCAGTC
TAATCCCN--
 G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCAGTC
ATAATCCC---
 A C G T G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAGCCAGTC------
CAAATCCAGACATCACA
 A C G T G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAGCCAGTC----
NNNNTGCCAGTGATTG
 A C G T A C G T G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAAGCCAGTC---
NWTAAYCYAATCAWN
 A C G T A C G T G C A T C G T A G C T A A C T G G A T C G A T C T G C A T C A G C G A T T A G C A C G T A C G T A C G T
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T