Information for 3-GGGCTAAAAT (Motif 13)

C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T
Reverse Opposite:
G T C A A C G T G C A T A G C T G A C T C G T A A T C G G A T C G A T C G A T C
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.663
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif314.5
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets48.6 +/- 28.1bp
Average Position of motif in Background49.9 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGCTAAAAT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGCTAAAAT--
ARGAGGMCAAAATGW
 A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTAAAAT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAAAT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PH0122.1_Obox2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAAAT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAAAT--
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGGCTAAAAT
NGGATTAN--
 C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAAAT--
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTAAAAT--
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGCTAAAAT
-NGCTN----
 C T A G C T A G C T A G T A G C G C A T C T G A T C G A C G T A T G C A C A G T
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T