Information for 3-GAGGAGSAACAMMRKT (Motif 7)

A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
Reverse Opposite:
C G T A G T C A G A C T A C T G A C T G A C G T A C T G A G C T A C G T A T G C A G T C C G A T T A G C G A T C A C G T A T G C
p-value:1e-12
log p-value:-2.879e+01
Information Content per bp:1.711
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 25.9bp
Average Position of motif in Background35.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGGAGSAACAMMRKT
-GGGAGGACNG-----
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GAGGAGSAACAMMRKT
--AGAGGAA-------
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAGGAGSAACAMMRKT-
-------AACAGCTGTT
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAGGAGSAACAMMRKT
----AGAAACGAAAGT
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGGAGSAACAMMRKT--
-CATAAGACCACCATTAC
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAGGAGSAACAMMRKT------
--GAAGTANCACGAATNMRAGT
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGAGSAACAMMRKT
----TGGAACAGMA--
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GAGGAGSAACAMMRKT
----TGGAAAA-----
 A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGSAACAMMRKT
ADGGYAGYAGCATCT--
 A C G T A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGSAACAMMRKT
CGGAAGTGAAAC------
 A C G T A C G T A T C G T G C A C T A G A T C G C G T A A C T G T A C G C G T A C T G A T G A C G T C A G T A C G T A C C T G A A C G T A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T