Information for 20-CTCTTACTATTCT (Motif 34)

A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T
Reverse Opposite:
C T G A A C T G C G T A C G T A A G C T C G T A A C T G A C G T C T G A C G T A A C T G G T C A A C T G
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.2 +/- 30.9bp
Average Position of motif in Background35.8 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCTTACTATTCT---
------CTATTTTTGG
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTCTTACTATTCT---
NNTTTATTGTTCTNNN
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTACTATTCT
NNCNNAACAATTNT
 A C G T A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCTTACTATTCT
TCACTTTCACTTTCN-
 A C G T A C G T A C G T A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTACTATTCT---
TNCNNAACAATTTTTNC
 A C G T A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTCTTACTATTCT----
---TAATTGTTCTAAAC
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTCTTACTATTCT-
--GTTTCACTTCCG
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T
A C G T A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTCTTACTATTCT------
----TTCTATTTTTAGNNN
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCTTACTATTCT
-ACTTTCGTTTCT
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T
A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTCTTACTATTCT
-ACTTCCTGTT--
 A G T C C A G T A G T C A C G T A G C T C G T A A G T C A C G T C T G A A C G T A C G T A G T C A G C T
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T