Information for 12-CDRCCGCATGCACAGG (Motif 18)

A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
Reverse Opposite:
A T G C A G T C A G C T C T A G A G C T A T C G A G T C C T G A C G A T A C T G G T A C C T A G A T C G G A T C G T A C C T A G
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.735
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.9 +/- 23.5bp
Average Position of motif in Background46.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CDRCCGCATGCACAGG
---GCGCATGCGCAG-
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CDRCCGCATGCACAGG
---GCGCATGCGCAC-
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CDRCCGCATGCACAGG---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CDRCCGCATGCACAGG
---GCGCCTGCGCA--
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:10
Orientation:reverse strand
Alignment:CDRCCGCATGCACAGG
----------CACAGN
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CDRCCGCATGCACAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CDRCCGCATGCACAGG
-----CCAGGAACAG-
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CDRCCGCATGCACAGG---
-----ACATGCCCGGGCAT
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CDRCCGCATGCACAGG
---TBGCACGCAA---
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G
A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:CDRCCGCATGCACAGG--
--------TGCCCAGNHW
 A G T C C A T G C T A G A T G C A G T C C A T G A G T C G C T A A G C T A C T G T A G C C T G A A G T C C T G A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A