Information for 6-GGAGTAGGCT (Motif 17)

C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
Reverse Opposite:
T C G A A C T G A G T C A G T C A C G T T C G A T A G C C A G T A G T C A G T C
p-value:1e-2
log p-value:-5.612e+00
Information Content per bp:1.698
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.04%
Number of Background Sequences with motif1499.8
Percentage of Background Sequences with motif3.27%
Average Position of motif in Targets56.1 +/- 25.9bp
Average Position of motif in Background50.4 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTAGGCT
GGGAGGACNG-
 A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAGTAGGCT
GGATTAGC--
 C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTAGGCT
NNGGATTAGN--
 A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-11
Orientation:forward strand
Alignment:-----------GGAGTAGGCT
SMCAGTCWGAKGGAGGAGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTAGGCT
GNGGATTAGN--
 A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAGGCT
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTAGGCT
GGGATTANN--
 A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTAGGCT
VRGGATTARN--
 A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTAGGCT--
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGAGTAGGCT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G G C T A A T C G A G C T C G T A C T A G T C A G G T A C A G C T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A