Information for 13-AGAATTCTGTGAC (Motif 16)

C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C C G T A A G T C C G T A A T C G C G T A C G T A A C G T A C G T A G T C A G C T
p-value:1e-3
log p-value:-7.258e+00
Information Content per bp:1.922
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 18.2bp
Average Position of motif in Background84.2 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAATTCTGTGAC--
RGSMTBCTGGGAAAT
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAATTCTGTGAC--
TGAACCCGATGACCC
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAATTCTGTGAC
---RTCATGTGAC
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAATTCTGTGAC---
NNNNTTGTGTGCTTNN
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGAATTCTGTGAC-
------NCGTGACN
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGAATTCTGTGAC----
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGAATTCTGTGAC
---ATGGGGTGAT
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-9
Orientation:reverse strand
Alignment:---------AGAATTCTGTGAC---
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGAATTCTGTGAC
-----GCTGTG--
 C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGAATTCTGTGAC
NNNCCATTGTGTNAN
 A C G T A C G T C T G A A C T G C G T A C G T A A C G T C G A T A T G C A C G T A C T G A C G T A C T G C G T A A G T C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G