Information for 6-CTCGAGGACT (Motif 9)

A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
Reverse Opposite:
C T G A A C T G C G A T A G T C A G T C A G C T G T A C A T C G C G T A A C T G
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.852
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif69.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets48.6 +/- 29.2bp
Average Position of motif in Background47.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0006.1_Bcl6b_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCGAGGACT---
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCGAGGACT
--CNAGGCCT
 A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCGAGGACT
--CTAGGCCT
 A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCGAGGACT
NGCTTTCTAGGAAN
 A C G T A C G T A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCGAGGACT
NTCAAGGTCA
 A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Tcfl5/MA0632.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCGAGGACT
GGCACGTGCC--
 A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCGAGGACT
GGCTCYAKCAYC
 A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCGAGGACT
BTCAAGGTCA
 A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTCGAGGACT
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTCGAGGACT--
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A G T C A C G T A T G C C A T G C T G A A C T G A C T G G C T A T A G C A G C T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C