Information for 1-GGATCCCTCCGCCCCN (Motif 2)

C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T
Reverse Opposite:
C G T A A T C G T A C G A C T G A C T G A G T C A C T G A T C G C G T A A C T G A C T G A T C G C T G A A G C T G A T C A G T C
p-value:1e-18
log p-value:-4.277e+01
Information Content per bp:1.773
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 19.8bp
Average Position of motif in Background26.0 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0202.1_Zfp410_2/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN----
---TCACCCCGCCCCAAATT
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN
---CCCCTCCCCCAC-
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T
A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GGATCCCTCCGCCCCN-
-----GCTCCGCCCMCY
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN
-----GCCCCGCCCCC
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN-
--GCCCCGCCCCCTCCC
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN
--CCCCCGCCCCCGCC
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN----
----ATCCCCGCCCCTAAAA
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGATCCCTCCGCCCCN-
---NAGCCCCGCCCCCN
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN
----GGCCCCGCCCCC
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGATCCCTCCGCCCCN---
--TACGCCCCGCCACTCTG
 C T A G C A T G T C G A A G C T A T G C A G T C A G T C A C G T A T G C A G T C A C T G A G T C A G T C A T G C A T G C G A C T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G