Information for 3-CCTGACYTKSMAAGTW (Motif 12)

A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
Reverse Opposite:
C G T A C G T A A G T C A C G T C G A T A C T G A T C G G T A C C G T A C T A G A C T G A C G T A G T C C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.862
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 20.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGACYTKSMAAGTW
-NTGACCTTGA-----
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
--TGACCTTGAT----
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
-ATGACCTTGA-----
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
-ATGACCTTGAA----
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
--TGACCT--------
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
--TGACCTYA------
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
-GTGACCTT-------
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
--TGACCTTGAV----
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTGACYTKSMAAGTW
GCTGACCTTGAACTN-
 A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTGACYTKSMAAGTW
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G C G T A A G T C G A T C A C G T A C T G T A C G G T A C C G T A C G T A A C T G A C G T C G A T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T