Information for 16-TCCTAGTCACTCT (Motif 24)

A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A T C G C G A T A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A
p-value:1e-8
log p-value:-1.976e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 15.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TCCTAGTCACTCT
GATAACATCCTAGTAG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCCTAGTCACTCT
----AGTCACGC-
 A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCCTAGTCACTCT
TACCCTAGTTACCGA
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCCTAGTCACTCT---------
AACTCCTAYTCATCCTTCAAAACCC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C A C G T A G T C A G T C A C G T C G T A A G C T C G A T A G T C C G T A G A C T A G T C A G T C G A C T C A G T A G T C G T C A C T G A C T G A C T G A G T A C A G T C A G T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCTAGTCACTCT--
----AGCCACTCAAG
 A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCCTAGTCACTCT
NTTATTCGTCATNC-
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCTAGTCACTCT
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCTAGTCACTCT
SCCTAGCAACAG-
 A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TCCTAGTCACTCT-
----MRSCACTYAA
 A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TCCTAGTCACTCT-
--SCTGTCAVTCAV
 A C G T A G T C A G T C A C G T C G T A A C T G C A G T A G T C C G T A A T G C A C G T A G T C A C G T A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A