Information for 8-GCTGTGAGCTGCCGGY (Motif 18)

A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
Reverse Opposite:
C T G A G T A C G T A C A C T G A T C G A T G C C G T A A C T G T A G C A C G T G T A C G T C A A T G C G T C A C T A G A T G C
p-value:1e-9
log p-value:-2.149e+01
Information Content per bp:1.747
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif25.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.6 +/- 28.0bp
Average Position of motif in Background48.0 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY
---GTGACCTT-----
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY
---CGGAGC-------
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY
----TGACCT------
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY
SCTGTCARCACC----
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCTGTGAGCTGCCGGY
-----CAGCC------
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY
--NNGCAGCTGTC---
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCTGTGAGCTGCCGGY
---AGCAGCTGCTNN-
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCTGTGAGCTGCCGGY-
-------ACTTCCGGTN
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCTGTGAGCTGCCGGY
----NCAGCTGCTG--
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCTGTGAGCTGCCGGY
---CGCAGCTGCG---
 A T C G A G T C A C G T A T C G A C G T A C T G C G T A A T C G A G T C C G A T A T C G A T G C G T A C A C T G A C T G A G C T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T