Information for 7-CAGAGATTCMTGMYCA (Motif 17)

G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
Reverse Opposite:
C G A T C A T G C T G A A C G T A G T C C G T A A C G T C T A G G T C A C G T A C G A T A T G C C G A T A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.704
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 26.4bp
Average Position of motif in Background49.8 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATTCMTGMYCA
GCAGTGATTT-------
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGATTCMTGMYCA
TGCTGTGATTT-------
 A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGAGATTCMTGMYCA
CNGTGATTTN------
 G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGATTCMTGMYCA
SCAGYCADGCATGAC--
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CAGAGATTCMTGMYCA
NNNNTGCCAGTGATTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGAGATTCMTGMYCA
GCAGCCAAGCGTGACN-
 A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAGAGATTCMTGMYCA
GACAGAGATATCAGTGT-
 A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAGAGATTCMTGMYCA
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGAGATTCMTGMYCA
---TGATTTATGGCC-
 G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
A C G T A C G T A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGAGATTCMTGMYCA
--NTGATTTATGGCC-
 G T A C C G T A A T C G C G T A A T C G C G T A A C G T C A G T A G T C G T C A G A C T T C A G G T C A G A C T G A T C C G T A
A C G T A C G T T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T